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Barium in PDB 2cis: Structure-Based Functional Annotation: Yeast YMR099C Codes For A D- Hexose-6-Phosphate Mutarotase. Complex with Tagatose-6-Phosphate

Enzymatic activity of Structure-Based Functional Annotation: Yeast YMR099C Codes For A D- Hexose-6-Phosphate Mutarotase. Complex with Tagatose-6-Phosphate

All present enzymatic activity of Structure-Based Functional Annotation: Yeast YMR099C Codes For A D- Hexose-6-Phosphate Mutarotase. Complex with Tagatose-6-Phosphate:
5.1.3.15;

Protein crystallography data

The structure of Structure-Based Functional Annotation: Yeast YMR099C Codes For A D- Hexose-6-Phosphate Mutarotase. Complex with Tagatose-6-Phosphate, PDB code: 2cis was solved by M.Graille, J.-P.Baltaze, N.Leulliot, D.Liger, S.Quevillon-Cheruel, H.Vantilbeurgh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.62
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 43.000, 156.300, 104.000, 90.00, 90.00, 90.00
R / Rfree (%) 18.6 / 21.2

Barium Binding Sites:

The binding sites of Barium atom in the Structure-Based Functional Annotation: Yeast YMR099C Codes For A D- Hexose-6-Phosphate Mutarotase. Complex with Tagatose-6-Phosphate (pdb code 2cis). This binding sites where shown within 5.0 Angstroms radius around Barium atom.
In total only one binding site of Barium was determined in the Structure-Based Functional Annotation: Yeast YMR099C Codes For A D- Hexose-6-Phosphate Mutarotase. Complex with Tagatose-6-Phosphate, PDB code: 2cis:

Barium binding site 1 out of 1 in 2cis

Go back to Barium Binding Sites List in 2cis
Barium binding site 1 out of 1 in the Structure-Based Functional Annotation: Yeast YMR099C Codes For A D- Hexose-6-Phosphate Mutarotase. Complex with Tagatose-6-Phosphate


Mono view


Stereo pair view

A full contact list of Barium with other atoms in the Ba binding site number 1 of Structure-Based Functional Annotation: Yeast YMR099C Codes For A D- Hexose-6-Phosphate Mutarotase. Complex with Tagatose-6-Phosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ba1291

b:13.8
occ:0.50
 O A:HOH2136 2.7 24.2 1.0
O3 A:TA61290 2.7 18.9 1.0
O A:HOH2373 2.8 19.8 1.0
O A:HOH2376 2.9 26.4 1.0
O A:HOH2282 2.9 23.9 1.0
O4 A:TA61290 3.0 19.7 1.0
O A:HOH2283 3.1 28.6 1.0
C4 A:TA61290 3.8 17.2 1.0
C3 A:TA61290 3.9 16.5 1.0
OD2 A:ASP203 4.2 15.4 1.0
OE1 A:GLN81 4.3 20.7 1.0
O2 A:TA61290 4.5 18.3 1.0
NE2 A:GLN81 4.6 18.6 1.0
O A:HOH2274 4.6 19.0 1.0
O A:HOH2277 4.6 30.3 1.0
O A:HOH2375 4.6 25.2 1.0
C2 A:TA61290 4.8 16.8 1.0
CD A:GLN81 4.9 18.8 1.0
O A:HOH2001 4.9 21.5 1.0

Reference:

M.Graille, J.P.Baltaze, N.Leulliot, D.Liger, S.Quevillon-Cheruel, H.Van Tilbeurgh. Structure-Based Functional Annotation: Yeast YMR099C Codes For A D-Hexose-6-Phosphate Mutarotase. J. Biol. Chem. V. 281 30175 2006.
ISSN: ISSN 0021-9258
PubMed: 16857670
DOI: 10.1074/JBC.M604443200
Page generated: Sat Dec 12 01:55:15 2020

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