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Barium in PDB 3e8v: Crystal Structure of A Possible Transglutaminase-Family Protein Proteolytic Fragment From Bacteroides Fragilis

Protein crystallography data

The structure of Crystal Structure of A Possible Transglutaminase-Family Protein Proteolytic Fragment From Bacteroides Fragilis, PDB code: 3e8v was solved by J.B.Bonanno, M.Rutter, K.T.Bain, S.Hu, R.Romero, D.Smith, S.Wasserman, J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgx Research Center Forstructural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 15.00 / 2.40
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 82.006, 82.006, 32.367, 90.00, 90.00, 120.00
R / Rfree (%) 22.5 / 24.3

Barium Binding Sites:

The binding sites of Barium atom in the Crystal Structure of A Possible Transglutaminase-Family Protein Proteolytic Fragment From Bacteroides Fragilis (pdb code 3e8v). This binding sites where shown within 5.0 Angstroms radius around Barium atom.
In total only one binding site of Barium was determined in the Crystal Structure of A Possible Transglutaminase-Family Protein Proteolytic Fragment From Bacteroides Fragilis, PDB code: 3e8v:

Barium binding site 1 out of 1 in 3e8v

Go back to Barium Binding Sites List in 3e8v
Barium binding site 1 out of 1 in the Crystal Structure of A Possible Transglutaminase-Family Protein Proteolytic Fragment From Bacteroides Fragilis


Mono view


Stereo pair view

A full contact list of Barium with other atoms in the Ba binding site number 1 of Crystal Structure of A Possible Transglutaminase-Family Protein Proteolytic Fragment From Bacteroides Fragilis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ba1

b:39.9
occ:0.50
NE2 A:HIS331 2.4 36.7 1.0
OE2 A:GLU363 2.4 32.6 1.0
OE1 A:GLU363 2.7 36.7 1.0
CD A:GLU363 2.9 36.9 1.0
CE1 A:HIS331 3.2 36.8 1.0
CD2 A:HIS331 3.4 35.3 1.0
ND1 A:HIS331 4.4 35.6 1.0
CG A:GLU363 4.4 38.7 1.0
CG A:HIS331 4.5 33.8 1.0
CD2 A:LEU294 4.8 29.0 1.0
CB A:LEU294 4.8 32.3 1.0

Reference:

J.B.Bonanno, M.Rutter, K.T.Bain, S.Hu, R.Romero, D.Smith, S.Wasserman, J.M.Sauder, S.K.Burley, S.C.Almo. Crystal Structure of A Possible Transglutaminase-Family Protein Proteolytic Fragment From Bacteroides Fragilis To Be Published.
Page generated: Sat Dec 12 01:55:43 2020

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