Atomistry » Barium » PDB 4e7y-4x18 » 4m3v
Atomistry »
  Barium »
    PDB 4e7y-4x18 »
      4m3v »

Barium in PDB 4m3v: X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga)

Protein crystallography data

The structure of X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga), PDB code: 4m3v was solved by H.Niyazi, S.Teixeira, E.Mitchell, T.Forsyth, C.Cardin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.93 / 2.05
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 52.220, 52.220, 34.520, 90.00, 90.00, 90.00
R / Rfree (%) 24.5 / 32.1

Other elements in 4m3v:

The structure of X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga) also contains other interesting chemical elements:

Ruthenium (Ru) 2 atoms

Barium Binding Sites:

The binding sites of Barium atom in the X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga) (pdb code 4m3v). This binding sites where shown within 5.0 Angstroms radius around Barium atom.
In total only one binding site of Barium was determined in the X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga), PDB code: 4m3v:

Barium binding site 1 out of 1 in 4m3v

Go back to Barium Binding Sites List in 4m3v
Barium binding site 1 out of 1 in the X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga)


Mono view


Stereo pair view

A full contact list of Barium with other atoms in the Ba binding site number 1 of X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ba103

b:41.5
occ:1.00
O4 A:DT5 2.9 52.6 1.0
N7 A:DG3 3.0 45.0 1.0
O6 A:DG4 3.0 29.6 1.0
N7 A:DG4 3.1 31.0 1.0
C8 A:DG3 3.6 42.0 1.0
C6 A:DG4 3.6 30.7 1.0
C5 A:DG4 3.7 31.2 1.0
C4 A:DT5 3.9 43.4 1.0
C5 A:DG3 4.2 36.9 1.0
C8 A:DG4 4.2 29.4 1.0
OP2 A:DG3 4.5 44.7 1.0
O6 A:DG3 4.6 34.7 1.0
C7 A:DT5 4.7 49.5 1.0
N3 A:DT5 4.7 35.3 1.0
C5 A:DT5 4.7 43.0 1.0
C6 A:DG3 4.8 35.6 1.0
N9 A:DG3 4.9 41.1 1.0

Reference:

H.Niyazi, S.Teixeira, E.Mitchell, T.Forsyth, C.Cardin. X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz-{ME2})]2+ Bound to D(Tcggtaccga) To Be Published.
Page generated: Sat Dec 12 01:56:49 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy