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Barium in PDB 4m3v: X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga)

Protein crystallography data

The structure of X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga), PDB code: 4m3v was solved by H.Niyazi, S.Teixeira, E.Mitchell, T.Forsyth, C.Cardin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.93 / 2.05
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 52.220, 52.220, 34.520, 90.00, 90.00, 90.00
R / Rfree (%) 24.5 / 32.1

Other elements in 4m3v:

The structure of X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga) also contains other interesting chemical elements:

Ruthenium (Ru) 2 atoms

Barium Binding Sites:

The binding sites of Barium atom in the X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga) (pdb code 4m3v). This binding sites where shown within 5.0 Angstroms radius around Barium atom.
In total only one binding site of Barium was determined in the X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga), PDB code: 4m3v:

Barium binding site 1 out of 1 in 4m3v

Go back to Barium Binding Sites List in 4m3v
Barium binding site 1 out of 1 in the X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga)


Mono view


Stereo pair view

A full contact list of Barium with other atoms in the Ba binding site number 1 of X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ba103

b:41.5
occ:1.00
O4 A:DT5 2.9 52.6 1.0
N7 A:DG3 3.0 45.0 1.0
O6 A:DG4 3.0 29.6 1.0
N7 A:DG4 3.1 31.0 1.0
C8 A:DG3 3.6 42.0 1.0
C6 A:DG4 3.6 30.7 1.0
C5 A:DG4 3.7 31.2 1.0
C4 A:DT5 3.9 43.4 1.0
C5 A:DG3 4.2 36.9 1.0
C8 A:DG4 4.2 29.4 1.0
OP2 A:DG3 4.5 44.7 1.0
O6 A:DG3 4.6 34.7 1.0
C7 A:DT5 4.7 49.5 1.0
N3 A:DT5 4.7 35.3 1.0
C5 A:DT5 4.7 43.0 1.0
C6 A:DG3 4.8 35.6 1.0
N9 A:DG3 4.9 41.1 1.0

Reference:

H.Niyazi, S.Teixeira, E.Mitchell, T.Forsyth, C.Cardin. X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz-{ME2})]2+ Bound to D(Tcggtaccga) To Be Published.
Page generated: Sat Dec 12 01:56:49 2020

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