Atomistry » Barium » PDB 4e7y-4x18 » 4m3v
Atomistry »
  Barium »
    PDB 4e7y-4x18 »
      4m3v »

Barium in PDB 4m3v: X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga)

Protein crystallography data

The structure of X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga), PDB code: 4m3v was solved by H.Niyazi, S.Teixeira, E.Mitchell, T.Forsyth, C.Cardin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.93 / 2.05
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 52.220, 52.220, 34.520, 90.00, 90.00, 90.00
R / Rfree (%) 24.5 / 32.1

Other elements in 4m3v:

The structure of X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga) also contains other interesting chemical elements:

Ruthenium (Ru) 2 atoms

Barium Binding Sites:

The binding sites of Barium atom in the X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga) (pdb code 4m3v). This binding sites where shown within 5.0 Angstroms radius around Barium atom.
In total only one binding site of Barium was determined in the X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga), PDB code: 4m3v:

Barium binding site 1 out of 1 in 4m3v

Go back to Barium Binding Sites List in 4m3v
Barium binding site 1 out of 1 in the X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga)


Mono view


Stereo pair view

A full contact list of Barium with other atoms in the Ba binding site number 1 of X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz- {ME2})]2+ Bound to D(Tcggtaccga) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ba103

b:41.5
occ:1.00
O4 A:DT5 2.9 52.6 1.0
N7 A:DG3 3.0 45.0 1.0
O6 A:DG4 3.0 29.6 1.0
N7 A:DG4 3.1 31.0 1.0
C8 A:DG3 3.6 42.0 1.0
C6 A:DG4 3.6 30.7 1.0
C5 A:DG4 3.7 31.2 1.0
C4 A:DT5 3.9 43.4 1.0
C5 A:DG3 4.2 36.9 1.0
C8 A:DG4 4.2 29.4 1.0
OP2 A:DG3 4.5 44.7 1.0
O6 A:DG3 4.6 34.7 1.0
C7 A:DT5 4.7 49.5 1.0
N3 A:DT5 4.7 35.3 1.0
C5 A:DT5 4.7 43.0 1.0
C6 A:DG3 4.8 35.6 1.0
N9 A:DG3 4.9 41.1 1.0

Reference:

H.Niyazi, S.Teixeira, E.Mitchell, T.Forsyth, C.Cardin. X-Ray Crystal Structure of the Ruthenium Complex [Ru(Tap)2(Dppz-{ME2})]2+ Bound to D(Tcggtaccga) To Be Published.
Page generated: Mon Jul 7 02:24:02 2025

Last articles

Cl in 7TSG
Cl in 7TSH
Cl in 7TRU
Cl in 7TPM
Cl in 7TRT
Cl in 7TRP
Cl in 7TQM
Cl in 7TP6
Cl in 7TQ5
Cl in 7TQ4
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy