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Barium in PDB 5cqc: Crystal Structure of the Legionella Pneumophila Effector Protein Ravz

Protein crystallography data

The structure of Crystal Structure of the Legionella Pneumophila Effector Protein Ravz, PDB code: 5cqc was solved by F.A.Horenkamp, K.M.Reinisch, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 68.94 / 2.99
Space group I 4 2 2
Cell size a, b, c (Å), α, β, γ (°) 221.778, 221.778, 72.536, 90.00, 90.00, 90.00
R / Rfree (%) 21.4 / 25

Barium Binding Sites:

The binding sites of Barium atom in the Crystal Structure of the Legionella Pneumophila Effector Protein Ravz (pdb code 5cqc). This binding sites where shown within 5.0 Angstroms radius around Barium atom.
In total only one binding site of Barium was determined in the Crystal Structure of the Legionella Pneumophila Effector Protein Ravz, PDB code: 5cqc:

Barium binding site 1 out of 1 in 5cqc

Go back to Barium Binding Sites List in 5cqc
Barium binding site 1 out of 1 in the Crystal Structure of the Legionella Pneumophila Effector Protein Ravz


Mono view


Stereo pair view

A full contact list of Barium with other atoms in the Ba binding site number 1 of Crystal Structure of the Legionella Pneumophila Effector Protein Ravz within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ba501

b:0.7
occ:1.00
OD1 A:ASP137 2.8 0.9 1.0
O A:VAL135 3.1 0.2 1.0
OD2 A:ASP140 3.2 0.3 1.0
CG A:ASP137 4.0 0.7 1.0
C A:VAL135 4.2 89.6 1.0
O A:HOH601 4.3 82.8 1.0
CG A:ASP140 4.4 0.8 1.0
N A:ASP137 4.4 86.1 1.0
CA A:ASP137 4.5 93.0 1.0
N A:VAL135 4.5 79.8 1.0
C A:ASN136 4.6 90.7 1.0
CA A:VAL135 4.8 79.4 1.0
O A:ASN136 4.8 90.2 1.0
OD2 A:ASP137 4.9 0.4 1.0
CB A:VAL135 4.9 79.5 1.0
CB A:ASP137 4.9 0.7 1.0
CB A:ASP140 4.9 0.9 1.0

Reference:

F.A.Horenkamp, K.J.Kauffman, L.J.Kohler, R.K.Sherwood, K.P.Krueger, V.Shteyn, C.R.Roy, T.J.Melia, K.M.Reinisch. The Legionella Anti-Autophagy Effector Ravz Targets the Autophagosome Via PI3P- and Curvature-Sensing Motifs. Dev.Cell V. 34 569 2015.
ISSN: ISSN 1534-5807
PubMed: 26343456
DOI: 10.1016/J.DEVCEL.2015.08.010
Page generated: Sat Dec 12 01:57:14 2020

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