Atomistry » Barium » PDB 5wky-7awm » 6kl7
Atomistry »
  Barium »
    PDB 5wky-7awm »
      6kl7 »

Barium in PDB 6kl7: Beta-Arrestin 1 Mutant S13D/T275D

Protein crystallography data

The structure of Beta-Arrestin 1 Mutant S13D/T275D, PDB code: 6kl7 was solved by H.Kang, H.J.Choi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.10 / 2.79
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 62.441, 76.835, 119.456, 90.00, 100.93, 90.00
R / Rfree (%) 21.8 / 27.4

Barium Binding Sites:

The binding sites of Barium atom in the Beta-Arrestin 1 Mutant S13D/T275D (pdb code 6kl7). This binding sites where shown within 5.0 Angstroms radius around Barium atom.
In total 5 binding sites of Barium where determined in the Beta-Arrestin 1 Mutant S13D/T275D, PDB code: 6kl7:
Jump to Barium binding site number: 1; 2; 3; 4; 5;

Barium binding site 1 out of 5 in 6kl7

Go back to Barium Binding Sites List in 6kl7
Barium binding site 1 out of 5 in the Beta-Arrestin 1 Mutant S13D/T275D


Mono view


Stereo pair view

A full contact list of Barium with other atoms in the Ba binding site number 1 of Beta-Arrestin 1 Mutant S13D/T275D within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ba1001

b:0.7
occ:1.00
O A:THR273 2.8 89.4 1.0
OE1 A:GLU256 3.4 0.0 1.0
OG1 A:THR273 3.5 90.3 1.0
C A:THR273 3.9 78.8 1.0
CD A:GLU256 4.4 0.7 1.0
CB A:THR273 4.6 62.8 1.0
CA A:THR273 4.6 79.4 1.0
OE2 A:GLU256 4.7 0.7 1.0
N A:THR273 4.7 72.2 1.0
N A:LEU274 4.8 79.8 1.0
CA A:LEU274 4.9 84.8 1.0

Barium binding site 2 out of 5 in 6kl7

Go back to Barium Binding Sites List in 6kl7
Barium binding site 2 out of 5 in the Beta-Arrestin 1 Mutant S13D/T275D


Mono view


Stereo pair view

A full contact list of Barium with other atoms in the Ba binding site number 2 of Beta-Arrestin 1 Mutant S13D/T275D within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ba1002

b:0.3
occ:1.00
O A:THR186 2.9 93.8 1.0
C A:THR186 4.1 66.2 1.0
OE2 A:GLU185 4.2 0.5 1.0
N A:THR186 4.3 72.3 1.0
OG1 A:THR186 4.6 91.7 1.0
CA A:THR186 4.8 72.4 1.0

Barium binding site 3 out of 5 in 6kl7

Go back to Barium Binding Sites List in 6kl7
Barium binding site 3 out of 5 in the Beta-Arrestin 1 Mutant S13D/T275D


Mono view


Stereo pair view

A full contact list of Barium with other atoms in the Ba binding site number 3 of Beta-Arrestin 1 Mutant S13D/T275D within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Ba1003

b:0.1
occ:1.00
OE2 A:GLU110 3.0 0.2 1.0
CD A:GLU110 4.0 0.8 1.0
OE1 A:GLU110 4.4 1.0 1.0

Barium binding site 4 out of 5 in 6kl7

Go back to Barium Binding Sites List in 6kl7
Barium binding site 4 out of 5 in the Beta-Arrestin 1 Mutant S13D/T275D


Mono view


Stereo pair view

A full contact list of Barium with other atoms in the Ba binding site number 4 of Beta-Arrestin 1 Mutant S13D/T275D within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ba1001

b:0.5
occ:1.00
O B:THR273 3.1 81.7 1.0
OG1 B:THR273 3.4 87.5 1.0
OE1 B:GLU256 4.1 0.2 1.0
C B:THR273 4.2 80.6 1.0
CD B:GLU256 4.6 0.1 1.0
CB B:THR273 4.6 76.1 1.0
N B:THR273 4.7 69.7 1.0
OE2 B:GLU256 4.8 0.9 1.0
CA B:THR273 4.8 85.2 1.0

Barium binding site 5 out of 5 in 6kl7

Go back to Barium Binding Sites List in 6kl7
Barium binding site 5 out of 5 in the Beta-Arrestin 1 Mutant S13D/T275D


Mono view


Stereo pair view

A full contact list of Barium with other atoms in the Ba binding site number 5 of Beta-Arrestin 1 Mutant S13D/T275D within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Ba1002

b:0.3
occ:1.00
O B:THR186 3.2 0.1 1.0
OE2 B:GLU185 3.6 0.9 1.0
C B:THR186 4.4 61.6 1.0
CD B:GLU185 4.6 0.9 1.0
N B:THR186 4.8 79.4 1.0
OE1 B:GLU185 5.0 0.5 1.0

Reference:

H.Kang, H.S.Yang, A.Y.Ki, S.B.Ko, K.W.Kim, C.Y.Shim, K.Kim, H.J.Choi, K.Y.Chung. Conformational Dynamics and Functional Implications of Phosphorylated Beta-Arrestins. Structure 2020.
ISSN: ISSN 0969-2126
PubMed: 31948726
DOI: 10.1016/J.STR.2019.12.008
Page generated: Wed Jul 10 15:57:34 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy